Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Clrn3Q8BHH8 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gm18018-201ENSMUST00000198273 408 ntBASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 G6pdx-201ENSMUST00000004327 2652 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Clrn3Q8BHH8 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Clrn3Q8BHH8 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms