Protein–RNA interactions for Protein: Q8BGH2

Samm50, Sorting and assembly machinery component 50 homolog, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Samm50Q8BGH2 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Samm50Q8BGH2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 AC192088.1-201ENSMUST00000227561 301 ntBASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Gm3695-201ENSMUST00000087222 1009 ntBASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Samm50Q8BGH2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm44414-201ENSMUST00000203660 2109 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm7114-201ENSMUST00000190159 1789 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm15376-201ENSMUST00000122258 783 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm26464-201ENSMUST00000157094 305 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm27701-201ENSMUST00000184498 110 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm28911-201ENSMUST00000188837 117 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Gm42863-201ENSMUST00000197875 2958 ntBASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Samm50Q8BGH2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms