Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Atg4bQ8BGE6 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm37861-201ENSMUST00000193534 2869 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Camp-201ENSMUST00000112022 758 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Proscos-202ENSMUST00000178990 666 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm7067-201ENSMUST00000207698 1249 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm16372-201ENSMUST00000073088 450 ntBASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.37□□□□□ -0.43
Atg4bQ8BGE6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm11424-201ENSMUST00000121929 829 ntBASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm11978-201ENSMUST00000122315 466 ntBASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm17794-201ENSMUST00000220252 955 ntBASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Gm45003-201ENSMUST00000205875 2158 ntBASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Atg4bQ8BGE6 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms