Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Gm8602-201ENSMUST00000184045 607 ntBASIC12.97□□□□□ -0.33
Ubp1Q811S7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.97□□□□□ -0.33
Ubp1Q811S7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.97□□□□□ -0.33
Ubp1Q811S7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Ano1-201ENSMUST00000033393 4585 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC12.97□□□□□ -0.33
Ubp1Q811S7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubp1Q811S7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm8652-201ENSMUST00000181363 964 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm9124-201ENSMUST00000191789 1092 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm9113-201ENSMUST00000192510 1018 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm45841-201ENSMUST00000207700 164 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 AC134335.2-201ENSMUST00000227660 440 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.96□□□□□ -0.33
Ubp1Q811S7 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.96□□□□□ -0.33
Ubp1Q811S7 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubp1Q811S7 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.95□□□□□ -0.34
Ubp1Q811S7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Ubp1Q811S7 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms