Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Mir6977-201ENSMUST00000184960 64 ntBASIC12.87□□□□□ -0.35
Ccdc116Q80X53 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Gm2495-201ENSMUST00000191160 466 ntBASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Gm36991-201ENSMUST00000191800 648 ntBASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Gm19931-201ENSMUST00000198920 368 ntBASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Gm45743-201ENSMUST00000212701 2795 ntBASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Ccdc116Q80X53 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm14350-201ENSMUST00000116642 640 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm5687-201ENSMUST00000118252 640 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm11978-201ENSMUST00000122315 466 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Mir6392-201ENSMUST00000184924 108 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm28196-201ENSMUST00000187719 640 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm44397-201ENSMUST00000195950 113 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Atg10-201ENSMUST00000022119 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Ccdc116Q80X53 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Ccdc116Q80X53 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.85□□□□□ -0.35
Ccdc116Q80X53 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms