Protein–RNA interactions for Protein: Q80WV7

Srrm3, Serine/arginine repetitive matrix protein 3, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm3Q80WV7 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Srrm3Q80WV7 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Gm12742-201ENSMUST00000117326 410 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Gm11425-201ENSMUST00000119608 498 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Gm9396-201ENSMUST00000076703 567 ntBASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Srrm3Q80WV7 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srrm3Q80WV7 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Srrm3Q80WV7 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srrm3Q80WV7 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Srrm3Q80WV7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Srrm3Q80WV7 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Mir3102-201ENSMUST00000175555 104 ntBASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Gm29667-201ENSMUST00000190817 490 ntBASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Gm45668-201ENSMUST00000211271 493 ntBASIC13.7□□□□□ -0.22
Srrm3Q80WV7 AC166349.1-201ENSMUST00000220866 695 ntBASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 AC166574.4-201ENSMUST00000227165 1937 ntBASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Srrm3Q80WV7 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Gm16907-201ENSMUST00000180734 2317 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Mroh5-202ENSMUST00000110021 2145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Gm43273-201ENSMUST00000199649 2594 ntBASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Ttpa-203ENSMUST00000121491 2862 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Gm6222-201ENSMUST00000120787 396 ntBASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Srrm3Q80WV7 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.69□□□□□ -0.22
Srrm3Q80WV7 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms