Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 AA619741-201ENSMUST00000195095 646 ntBASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Gm9347-201ENSMUST00000211473 1607 ntBASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Gm43860-201ENSMUST00000201742 2705 ntBASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 A430057M04Rik-201ENSMUST00000169054 3835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Fitm2-201ENSMUST00000109418 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Rnf220Q6PDX6 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Gm11745-201ENSMUST00000121669 448 ntBASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Cldn12-201ENSMUST00000060947 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Palm-204ENSMUST00000218631 2725 ntTSL 2 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 BC001981-202ENSMUST00000191393 1545 ntBASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Rnf220Q6PDX6 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gm6222-201ENSMUST00000120787 396 ntBASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gm36970-201ENSMUST00000193688 1859 ntBASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Rnf220Q6PDX6 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms