Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Gm28323-201ENSMUST00000186817 2499 ntBASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sp140Q6NSQ5 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gm15823-201ENSMUST00000064305 670 ntBASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Sp140Q6NSQ5 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Gm14350-201ENSMUST00000116642 640 ntBASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Gm45668-201ENSMUST00000211271 493 ntBASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Sp140Q6NSQ5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Sp140Q6NSQ5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms