Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Foxc1Q61572 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm42995-201ENSMUST00000197047 1330 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm20632-201ENSMUST00000176760 2427 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm12626-201ENSMUST00000117339 1983 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm12623-201ENSMUST00000119849 1983 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm42690-201ENSMUST00000197921 1836 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm38346-201ENSMUST00000192379 2639 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Ctcflos-203ENSMUST00000144256 1237 ntTSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm15200-201ENSMUST00000149950 410 ntTSL 2 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm21118-202ENSMUST00000187418 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm31326-201ENSMUST00000191856 1048 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm37576-201ENSMUST00000194228 372 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm44719-201ENSMUST00000206404 149 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Higd1a-202ENSMUST00000213124 713 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 AC155286.1-201ENSMUST00000218632 448 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm44065-201ENSMUST00000203184 3527 ntBASIC9.85□□□□□ -0.83
Foxc1Q61572 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.85□□□□□ -0.83
Foxc1Q61572 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Foxc1Q61572 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Foxc1Q61572 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm15240-201ENSMUST00000118156 720 ntBASIC9.84□□□□□ -0.83
Foxc1Q61572 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm15824-201ENSMUST00000119516 955 ntBASIC9.84□□□□□ -0.83
Foxc1Q61572 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC9.84□□□□□ -0.83
Foxc1Q61572 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm42464-201ENSMUST00000196717 417 ntBASIC9.84□□□□□ -0.83
Foxc1Q61572 Gm4971-201ENSMUST00000205991 1108 ntBASIC9.84□□□□□ -0.83
Foxc1Q61572 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC9.84□□□□□ -0.83
Foxc1Q61572 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms