Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Gm38144-201ENSMUST00000192790 465 ntBASIC12.62□□□□□ -0.39
ClpbQ60649 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
ClpbQ60649 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.62□□□□□ -0.39
ClpbQ60649 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClpbQ60649 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
ClpbQ60649 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
ClpbQ60649 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
ClpbQ60649 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
ClpbQ60649 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Gm5912-201ENSMUST00000122282 1438 ntBASIC12.62□□□□□ -0.39
ClpbQ60649 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
ClpbQ60649 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ClpbQ60649 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.61□□□□□ -0.39
ClpbQ60649 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Gm7287-201ENSMUST00000205267 602 ntBASIC12.61□□□□□ -0.39
ClpbQ60649 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
ClpbQ60649 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.61□□□□□ -0.39
ClpbQ60649 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.61□□□□□ -0.39
ClpbQ60649 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.61□□□□□ -0.39
ClpbQ60649 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.61□□□□□ -0.39
ClpbQ60649 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ClpbQ60649 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.6□□□□□ -0.39
ClpbQ60649 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
ClpbQ60649 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
ClpbQ60649 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.6□□□□□ -0.39
ClpbQ60649 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.6□□□□□ -0.39
ClpbQ60649 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.6□□□□□ -0.39
ClpbQ60649 Gm17150-201ENSMUST00000165577 381 ntBASIC12.6□□□□□ -0.39
ClpbQ60649 Gm27839-201ENSMUST00000184242 106 ntBASIC12.6□□□□□ -0.39
ClpbQ60649 Gm38671-201ENSMUST00000200573 130 ntBASIC12.6□□□□□ -0.39
ClpbQ60649 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.6□□□□□ -0.39
ClpbQ60649 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.6□□□□□ -0.39
ClpbQ60649 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ClpbQ60649 Gm15459-201ENSMUST00000117405 1941 ntBASIC12.6□□□□□ -0.39
ClpbQ60649 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.6□□□□□ -0.39
ClpbQ60649 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
ClpbQ60649 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms