Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trim40Q3UWA4 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm13385-201ENSMUST00000121089 220 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm44335-201ENSMUST00000196879 141 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm44297-201ENSMUST00000198304 141 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm44346-201ENSMUST00000198851 141 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Dupd1-202ENSMUST00000224735 548 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Nupl1-206ENSMUST00000225111 2936 ntBASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trim40Q3UWA4 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Gm21470-201ENSMUST00000187680 696 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Gm33320-201ENSMUST00000192232 530 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Gm43474-201ENSMUST00000196415 774 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Gm16476-201ENSMUST00000221544 139 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.29□□□□□ -0.44
Trim40Q3UWA4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trim40Q3UWA4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trim40Q3UWA4 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms