Protein–RNA interactions for Protein: Q3ULJ3

Upf3a, MCG3697, isoform CRA_c, mousemouse

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3aQ3ULJ3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Upf3aQ3ULJ3 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm10782-202ENSMUST00000223775 1480 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm12012-201ENSMUST00000118857 1066 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm2546-201ENSMUST00000182630 991 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm5869-201ENSMUST00000200248 1257 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm18753-201ENSMUST00000201000 566 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm13097-201ENSMUST00000210722 397 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Gm18615-201ENSMUST00000222919 1031 ntBASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Upf3aQ3ULJ3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gm19221-201ENSMUST00000221827 1477 ntBASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gm8862-201ENSMUST00000198379 1346 ntBASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gm23270-201ENSMUST00000104055 131 ntBASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gm25214-201ENSMUST00000104573 129 ntBASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 AC155637.1-201ENSMUST00000218560 636 ntBASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Upf3aQ3ULJ3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Upf3aQ3ULJ3 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms