Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Gm22018-201ENSMUST00000104357 131 ntBASIC11.4□□□□□ -0.58
Q3U1D9 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.4□□□□□ -0.58
Q3U1D9 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Q3U1D9 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC11.4□□□□□ -0.58
Q3U1D9 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC11.4□□□□□ -0.58
Q3U1D9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.4□□□□□ -0.58
Q3U1D9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC11.4□□□□□ -0.58
Q3U1D9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 AC154171.1-201ENSMUST00000224610 643 ntBASIC11.4□□□□□ -0.58
Q3U1D9 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Gm9823-201ENSMUST00000051212 327 ntBASIC11.4□□□□□ -0.58
Q3U1D9 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Q3U1D9 n-R5s195-201ENSMUST00000082891 119 ntBASIC11.4□□□□□ -0.58
Q3U1D9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Q3U1D9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.4□□□□□ -0.58
Q3U1D9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Q3U1D9 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.4□□□□□ -0.58
Q3U1D9 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Q3U1D9 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Q3U1D9 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC11.4□□□□□ -0.59
Q3U1D9 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Q3U1D9 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.59
Q3U1D9 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Q3U1D9 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.39□□□□□ -0.59
Q3U1D9 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Q3U1D9 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC11.39□□□□□ -0.59
Q3U1D9 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Q3U1D9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC11.39□□□□□ -0.59
Q3U1D9 Gm11978-201ENSMUST00000122315 466 ntBASIC11.39□□□□□ -0.59
Q3U1D9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.39□□□□□ -0.59
Q3U1D9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC11.39□□□□□ -0.59
Q3U1D9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC11.39□□□□□ -0.59
Q3U1D9 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC11.39□□□□□ -0.59
Q3U1D9 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.39□□□□□ -0.59
Q3U1D9 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC11.39□□□□□ -0.59
Q3U1D9 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.39□□□□□ -0.59
Q3U1D9 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Q3U1D9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.38□□□□□ -0.59
Q3U1D9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Q3U1D9 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Q3U1D9 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.38□□□□□ -0.59
Q3U1D9 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Q3U1D9 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Q3U1D9 Gm37042-201ENSMUST00000193816 581 ntBASIC11.38□□□□□ -0.59
Q3U1D9 Gm38297-201ENSMUST00000195122 1057 ntBASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms