Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Ptchd3Q0EEE2 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm15920-201ENSMUST00000118998 402 ntBASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm4804-201ENSMUST00000182234 999 ntBASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm27306-201ENSMUST00000183970 107 ntBASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm10766-202ENSMUST00000194123 606 ntBASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.68□□□□□ -0.38
Ptchd3Q0EEE2 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Ptchd3Q0EEE2 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ptchd3Q0EEE2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms