Protein–RNA interactions for Protein: Q08EE8

1700061G19Rik, RIKEN cDNA 1700061G19 gene, mousemouse

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700061G19RikQ08EE8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Gm8515-201ENSMUST00000194852 576 ntBASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
1700061G19RikQ08EE8 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Gm14928-201ENSMUST00000120198 477 ntBASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Gm38297-201ENSMUST00000195122 1057 ntBASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Gm18187-201ENSMUST00000196476 984 ntBASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 AC154239.3-201ENSMUST00000226933 674 ntBASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
1700061G19RikQ08EE8 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
1700061G19RikQ08EE8 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 122.2 ms