Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.2□□□□□ -0.14
Col9a2Q07643 Gm18753-201ENSMUST00000201000 566 ntBASIC14.2□□□□□ -0.14
Col9a2Q07643 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC14.2□□□□□ -0.14
Col9a2Q07643 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC14.2□□□□□ -0.14
Col9a2Q07643 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a2Q07643 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col9a2Q07643 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Col9a2Q07643 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a2Q07643 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a2Q07643 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a2Q07643 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a2Q07643 Gm10176-201ENSMUST00000159707 2264 ntBASIC14.2□□□□□ -0.14
Col9a2Q07643 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a2Q07643 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm8228-201ENSMUST00000189949 2192 ntBASIC14.19□□□□□ -0.14
Col9a2Q07643 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm9061-201ENSMUST00000182707 1006 ntBASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC14.19□□□□□ -0.14
Col9a2Q07643 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC14.19□□□□□ -0.14
Col9a2Q07643 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm42627-201ENSMUST00000197347 224 ntBASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm18584-201ENSMUST00000203098 964 ntBASIC14.19□□□□□ -0.14
Col9a2Q07643 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a2Q07643 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col9a2Q07643 Gm15897-201ENSMUST00000117770 1486 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Gm44775-201ENSMUST00000207266 1456 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Gm15782-201ENSMUST00000121073 445 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC14.18□□□□□ -0.14
Col9a2Q07643 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Hnf4aos-203ENSMUST00000141329 839 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Gm27243-201ENSMUST00000183964 521 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Gm38092-201ENSMUST00000195600 653 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Gm7046-201ENSMUST00000221351 977 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.18□□□□□ -0.14
Col9a2Q07643 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Col9a2Q07643 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.18□□□□□ -0.14
Col9a2Q07643 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.17□□□□□ -0.14
Col9a2Q07643 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC14.17□□□□□ -0.14
Col9a2Q07643 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Col9a2Q07643 Tmbim6-206ENSMUST00000161250 1148 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Col9a2Q07643 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.17□□□□□ -0.14
Col9a2Q07643 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.17□□□□□ -0.14
Col9a2Q07643 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms