Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm4271-201ENSMUST00000174444 973 ntBASIC12.43□□□□□ -0.42
Nkx3-2P97503 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm29705-201ENSMUST00000212598 474 ntBASIC12.43□□□□□ -0.42
Nkx3-2P97503 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.43□□□□□ -0.42
Nkx3-2P97503 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm2824-203ENSMUST00000226189 1228 ntBASIC12.43□□□□□ -0.42
Nkx3-2P97503 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Nkx3-2P97503 Sectm1b-201ENSMUST00000039309 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Gm27514-201ENSMUST00000183692 110 ntBASIC12.42□□□□□ -0.42
Nkx3-2P97503 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Gm42929-201ENSMUST00000198374 1286 ntBASIC12.42□□□□□ -0.42
Nkx3-2P97503 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.42□□□□□ -0.42
Nkx3-2P97503 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.42□□□□□ -0.42
Nkx3-2P97503 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Gm16372-201ENSMUST00000073088 450 ntBASIC12.42□□□□□ -0.42
Nkx3-2P97503 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Nkx3-2P97503 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.42□□□□□ -0.42
Nkx3-2P97503 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Gm37497-201ENSMUST00000195830 798 ntBASIC12.41□□□□□ -0.42
Nkx3-2P97503 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC12.41□□□□□ -0.42
Nkx3-2P97503 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.41□□□□□ -0.42
Nkx3-2P97503 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Nkx3-2P97503 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms