Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm28760-201ENSMUST00000185995 736 ntBASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm21470-201ENSMUST00000187680 696 ntBASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm29741-201ENSMUST00000192667 421 ntBASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.58□□□□□ -0.56
Sec61a1P61620 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.58□□□□□ -0.56
Sec61a1P61620 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sec61a1P61620 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Sec61a1P61620 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Atp8a1-202ENSMUST00000072971 7154 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Gm37714-201ENSMUST00000194742 342 ntBASIC11.57□□□□□ -0.56
Sec61a1P61620 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Gm18027-201ENSMUST00000218947 619 ntBASIC11.57□□□□□ -0.56
Sec61a1P61620 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Sec61a1P61620 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.57□□□□□ -0.56
Sec61a1P61620 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Sec61a1P61620 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Sec61a1P61620 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC11.56□□□□□ -0.56
Sec61a1P61620 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.56□□□□□ -0.56
Sec61a1P61620 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.56□□□□□ -0.56
Sec61a1P61620 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
Sec61a1P61620 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Sec61a1P61620 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Sec61a1P61620 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms