Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Cdh11P55288 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.99□□□□□ -0.49
Cdh11P55288 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Cdh11P55288 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Cdh11P55288 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Gm42480-201ENSMUST00000198434 2595 ntBASIC11.98□□□□□ -0.49
Cdh11P55288 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdh11P55288 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdh11P55288 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Mir698-201ENSMUST00000102164 109 ntBASIC11.98□□□□□ -0.49
Cdh11P55288 Gm11478-201ENSMUST00000117851 599 ntBASIC11.98□□□□□ -0.49
Cdh11P55288 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Cdh11P55288 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.98□□□□□ -0.49
Cdh11P55288 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
Cdh11P55288 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.98□□□□□ -0.49
Cdh11P55288 Gm9908-201ENSMUST00000211534 448 ntBASIC11.98□□□□□ -0.49
Cdh11P55288 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC11.98□□□□□ -0.49
Cdh11P55288 AC155286.1-201ENSMUST00000218632 448 ntBASIC11.98□□□□□ -0.49
Cdh11P55288 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Cdh11P55288 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdh11P55288 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Cdh11P55288 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Cdh11P55288 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Cdh11P55288 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdh11P55288 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Cdh11P55288 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.97□□□□□ -0.49
Cdh11P55288 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdh11P55288 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdh11P55288 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Cdh11P55288 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.97□□□□□ -0.49
Cdh11P55288 Mir6392-201ENSMUST00000184924 108 ntBASIC11.97□□□□□ -0.49
Cdh11P55288 Gm45384-201ENSMUST00000210451 277 ntBASIC11.97□□□□□ -0.49
Cdh11P55288 Gm17795-201ENSMUST00000214505 757 ntBASIC11.97□□□□□ -0.49
Cdh11P55288 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.97□□□□□ -0.49
Cdh11P55288 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Mir497b-201ENSMUST00000093601 125 ntBASIC11.97□□□□□ -0.49
Cdh11P55288 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.97□□□□□ -0.49
Cdh11P55288 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.97□□□□□ -0.49
Cdh11P55288 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Cdh11P55288 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Cdh11P55288 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Cdh11P55288 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.96□□□□□ -0.49
Cdh11P55288 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Cdh11P55288 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms