Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
Vps4bP46467 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC13.34□□□□□ -0.27
Vps4bP46467 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps4bP46467 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps4bP46467 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps4bP46467 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.34□□□□□ -0.27
Vps4bP46467 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vps4bP46467 Gm11478-201ENSMUST00000117851 599 ntBASIC13.34□□□□□ -0.27
Vps4bP46467 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.34□□□□□ -0.27
Vps4bP46467 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.34□□□□□ -0.27
Vps4bP46467 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.34□□□□□ -0.27
Vps4bP46467 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.34□□□□□ -0.27
Vps4bP46467 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.34□□□□□ -0.27
Vps4bP46467 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.34□□□□□ -0.27
Vps4bP46467 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vps4bP46467 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps4bP46467 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.34□□□□□ -0.27
Vps4bP46467 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Gm44851-201ENSMUST00000205735 2309 ntBASIC13.34□□□□□ -0.27
Vps4bP46467 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vps4bP46467 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vps4bP46467 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
Vps4bP46467 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
Vps4bP46467 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Vps4bP46467 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.33□□□□□ -0.27
Vps4bP46467 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.33□□□□□ -0.28
Vps4bP46467 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC13.33□□□□□ -0.28
Vps4bP46467 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps4bP46467 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps4bP46467 Gm15321-201ENSMUST00000121290 288 ntBASIC13.33□□□□□ -0.28
Vps4bP46467 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps4bP46467 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps4bP46467 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.33□□□□□ -0.28
Vps4bP46467 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps4bP46467 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps4bP46467 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps4bP46467 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps4bP46467 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Gm22189-201ENSMUST00000103822 86 ntBASIC13.32□□□□□ -0.28
Vps4bP46467 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4bP46467 Gm14928-201ENSMUST00000120198 477 ntBASIC13.32□□□□□ -0.28
Vps4bP46467 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps4bP46467 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Gm29608-201ENSMUST00000190444 463 ntBASIC13.32□□□□□ -0.28
Vps4bP46467 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps4bP46467 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.32□□□□□ -0.28
Vps4bP46467 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.32□□□□□ -0.28
Vps4bP46467 AC154276.1-201ENSMUST00000228874 1299 ntBASIC13.32□□□□□ -0.28
Vps4bP46467 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps4bP46467 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms