Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 AC073947.2-201ENSMUST00000215888 1130 ntBASIC12.68□□□□□ -0.38
Tnfsf4P43488 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Tnfsf4P43488 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Gm27838-201ENSMUST00000184829 128 ntBASIC12.67□□□□□ -0.38
Tnfsf4P43488 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.67□□□□□ -0.38
Tnfsf4P43488 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Tnfsf4P43488 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC12.66□□□□□ -0.38
Tnfsf4P43488 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.66□□□□□ -0.38
Tnfsf4P43488 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.66□□□□□ -0.38
Tnfsf4P43488 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.66□□□□□ -0.38
Tnfsf4P43488 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.66□□□□□ -0.38
Tnfsf4P43488 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Tnfsf4P43488 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms