Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
HttP42859 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.57□□□□□ -0.24
HttP42859 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.57□□□□□ -0.24
HttP42859 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Gm45594-201ENSMUST00000211717 241 ntBASIC13.57□□□□□ -0.24
HttP42859 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HttP42859 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HttP42859 Gm44401-201ENSMUST00000204462 2375 ntBASIC13.56□□□□□ -0.24
HttP42859 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Uqcc1-202ENSMUST00000109631 1091 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HttP42859 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC13.56□□□□□ -0.24
HttP42859 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC13.56□□□□□ -0.24
HttP42859 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Gm26013-201ENSMUST00000104404 119 ntBASIC13.56□□□□□ -0.24
HttP42859 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC13.56□□□□□ -0.24
HttP42859 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
HttP42859 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HttP42859 Rprl1-201ENSMUST00000158050 327 ntBASIC13.55□□□□□ -0.24
HttP42859 Gm25998-201ENSMUST00000175397 53 ntBASIC13.55□□□□□ -0.24
HttP42859 Gm6905-201ENSMUST00000205729 511 ntBASIC13.55□□□□□ -0.24
HttP42859 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.55□□□□□ -0.24
HttP42859 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.55□□□□□ -0.24
HttP42859 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.55□□□□□ -0.24
HttP42859 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.55□□□□□ -0.24
HttP42859 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HttP42859 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Nat8f7-202ENSMUST00000179613 686 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HttP42859 Gm17798-201ENSMUST00000182282 1035 ntBASIC13.55□□□□□ -0.24
HttP42859 Gm26989-201ENSMUST00000182608 749 ntBASIC13.55□□□□□ -0.24
HttP42859 Gm44953-201ENSMUST00000208745 1286 ntBASIC13.55□□□□□ -0.24
HttP42859 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC13.55□□□□□ -0.24
HttP42859 Gm19009-201ENSMUST00000223072 823 ntBASIC13.55□□□□□ -0.24
HttP42859 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.55□□□□□ -0.24
HttP42859 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
HttP42859 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.55□□□□□ -0.24
HttP42859 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Ly6e-207ENSMUST00000187606 735 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
HttP42859 AC165260.2-203ENSMUST00000224237 336 ntBASIC13.55□□□□□ -0.24
HttP42859 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
HttP42859 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
HttP42859 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Gm15352-201ENSMUST00000118696 270 ntBASIC13.54□□□□□ -0.24
HttP42859 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.54□□□□□ -0.24
HttP42859 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.54□□□□□ -0.24
HttP42859 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC13.54□□□□□ -0.24
HttP42859 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC13.54□□□□□ -0.24
HttP42859 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
HttP42859 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.54□□□□□ -0.24
HttP42859 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
HttP42859 Gm22711-201ENSMUST00000116890 133 ntBASIC13.54□□□□□ -0.24
HttP42859 Gm12943-201ENSMUST00000119616 210 ntBASIC13.54□□□□□ -0.24
HttP42859 Gm8723-201ENSMUST00000166076 820 ntBASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms