Protein–RNA interactions for Protein: P41105

Rpl28, 60S ribosomal protein L28, mousemouse

Known RBP Predictions only

Length 137 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl28P41105 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 AC241621.2-201ENSMUST00000223991 2151 ntBASIC8.83□□□□□ -1
Rpl28P41105 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Rpl28P41105 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rpl28P41105 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Gm15678-201ENSMUST00000117573 960 ntBASIC8.83□□□□□ -1
Rpl28P41105 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC8.83□□□□□ -1
Rpl28P41105 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC8.83□□□□□ -1
Rpl28P41105 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC8.83□□□□□ -1
Rpl28P41105 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC8.83□□□□□ -1
Rpl28P41105 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rpl28P41105 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC8.83□□□□□ -1
Rpl28P41105 Gm16476-201ENSMUST00000221544 139 ntBASIC8.83□□□□□ -1
Rpl28P41105 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC8.83□□□□□ -1
Rpl28P41105 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC8.83□□□□□ -1
Rpl28P41105 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC8.83□□□□□ -1
Rpl28P41105 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC8.83□□□□□ -1
Rpl28P41105 Sh3bp2-201ENSMUST00000067638 2885 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Rpl28P41105 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC8.82□□□□□ -1
Rpl28P41105 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC8.82□□□□□ -1
Rpl28P41105 Gm23935-201ENSMUST00000102303 57 ntBASIC8.82□□□□□ -1
Rpl28P41105 Gm24270-201ENSMUST00000102326 57 ntBASIC8.82□□□□□ -1
Rpl28P41105 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Gm15693-201ENSMUST00000120470 637 ntBASIC8.82□□□□□ -1
Rpl28P41105 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Gm24245-201ENSMUST00000157318 57 ntBASIC8.82□□□□□ -1
Rpl28P41105 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC8.82□□□□□ -1
Rpl28P41105 Gm27622-201ENSMUST00000183779 60 ntBASIC8.82□□□□□ -1
Rpl28P41105 Gm29541-201ENSMUST00000191351 678 ntBASIC8.82□□□□□ -1
Rpl28P41105 Gm37171-201ENSMUST00000192636 1185 ntBASIC8.82□□□□□ -1
Rpl28P41105 Gm37714-201ENSMUST00000194742 342 ntBASIC8.82□□□□□ -1
Rpl28P41105 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC8.82□□□□□ -1
Rpl28P41105 Gm5425-201ENSMUST00000214125 459 ntBASIC8.82□□□□□ -1
Rpl28P41105 AC156016.3-201ENSMUST00000228623 344 ntBASIC8.82□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 99.8 ms