Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC12.34□□□□□ -0.43
Sox6P40645 Gm21854-201ENSMUST00000179901 471 ntBASIC12.34□□□□□ -0.43
Sox6P40645 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Gm44719-201ENSMUST00000206404 149 ntBASIC12.34□□□□□ -0.43
Sox6P40645 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.34□□□□□ -0.43
Sox6P40645 AC139580.1-202ENSMUST00000223574 928 ntBASIC12.34□□□□□ -0.43
Sox6P40645 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Sox6P40645 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Sox6P40645 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox6P40645 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Sox6P40645 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Sox6P40645 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Sox6P40645 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.43
Sox6P40645 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.33□□□□□ -0.44
Sox6P40645 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox6P40645 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
Sox6P40645 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox6P40645 Gm28760-201ENSMUST00000185995 736 ntBASIC12.33□□□□□ -0.44
Sox6P40645 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox6P40645 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.33□□□□□ -0.44
Sox6P40645 Gm44855-201ENSMUST00000205725 362 ntBASIC12.33□□□□□ -0.44
Sox6P40645 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox6P40645 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.33□□□□□ -0.44
Sox6P40645 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.33□□□□□ -0.44
Sox6P40645 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Sox6P40645 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
Sox6P40645 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Sox6P40645 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Sox6P40645 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Syt7-205ENSMUST00000224135 1557 ntBASIC12.32□□□□□ -0.44
Sox6P40645 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox6P40645 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.32□□□□□ -0.44
Sox6P40645 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox6P40645 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Gm5866-201ENSMUST00000177881 973 ntBASIC12.32□□□□□ -0.44
Sox6P40645 Gm45195-201ENSMUST00000205597 1008 ntBASIC12.32□□□□□ -0.44
Sox6P40645 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.32□□□□□ -0.44
Sox6P40645 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Sox6P40645 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Sox6P40645 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Sox6P40645 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms