Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
TfamP40630 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TfamP40630 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.72□□□□□ -0.37
TfamP40630 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
TfamP40630 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.72□□□□□ -0.37
TfamP40630 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.72□□□□□ -0.37
TfamP40630 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.72□□□□□ -0.37
TfamP40630 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
TfamP40630 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.72□□□□□ -0.37
TfamP40630 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.72□□□□□ -0.37
TfamP40630 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.72□□□□□ -0.37
TfamP40630 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
TfamP40630 Gm42612-201ENSMUST00000197986 623 ntBASIC12.72□□□□□ -0.37
TfamP40630 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.72□□□□□ -0.37
TfamP40630 Gm43170-201ENSMUST00000199827 612 ntBASIC12.72□□□□□ -0.37
TfamP40630 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.72□□□□□ -0.37
TfamP40630 Gm42550-201ENSMUST00000201553 960 ntBASIC12.72□□□□□ -0.37
TfamP40630 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TfamP40630 Gm7730-201ENSMUST00000212486 454 ntBASIC12.72□□□□□ -0.37
TfamP40630 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.72□□□□□ -0.37
TfamP40630 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
TfamP40630 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
TfamP40630 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
TfamP40630 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
TfamP40630 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.71□□□□□ -0.37
TfamP40630 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.71□□□□□ -0.37
TfamP40630 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.71□□□□□ -0.37
TfamP40630 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Gm5354-201ENSMUST00000182417 973 ntBASIC12.71□□□□□ -0.37
TfamP40630 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.71□□□□□ -0.37
TfamP40630 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
TfamP40630 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TfamP40630 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
TfamP40630 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TfamP40630 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TfamP40630 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
TfamP40630 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.71□□□□□ -0.38
TfamP40630 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
TfamP40630 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
TfamP40630 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
TfamP40630 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC12.7□□□□□ -0.38
TfamP40630 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
TfamP40630 Brdt-201ENSMUST00000031215 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms