Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rom1P32958 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rom1P32958 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rom1P32958 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC10.38□□□□□ -0.75
Rom1P32958 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC10.38□□□□□ -0.75
Rom1P32958 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Rom1P32958 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rom1P32958 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Rom1P32958 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Gm13722-201ENSMUST00000117964 3066 ntBASIC10.37□□□□□ -0.75
Rom1P32958 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC10.37□□□□□ -0.75
Rom1P32958 Gm6018-201ENSMUST00000216090 1306 ntBASIC10.37□□□□□ -0.75
Rom1P32958 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Rom1P32958 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC10.37□□□□□ -0.75
Rom1P32958 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Gm24543-201ENSMUST00000103867 82 ntBASIC10.37□□□□□ -0.75
Rom1P32958 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.37□□□□□ -0.75
Rom1P32958 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Rom1P32958 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Gm21362-201ENSMUST00000194272 928 ntBASIC10.37□□□□□ -0.75
Rom1P32958 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Gm44124-201ENSMUST00000204159 472 ntBASIC10.37□□□□□ -0.75
Rom1P32958 Gm9229-201ENSMUST00000222777 126 ntBASIC10.37□□□□□ -0.75
Rom1P32958 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Rom1P32958 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.37□□□□□ -0.75
Rom1P32958 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.37□□□□□ -0.75
Rom1P32958 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Rom1P32958 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC10.37□□□□□ -0.75
Rom1P32958 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Itfg2-201ENSMUST00000001559 2320 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC10.36□□□□□ -0.75
Rom1P32958 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Rom1P32958 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC10.36□□□□□ -0.75
Rom1P32958 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rom1P32958 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Rom1P32958 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Rom1P32958 Gm37324-201ENSMUST00000194500 4504 ntBASIC10.36□□□□□ -0.75
Rom1P32958 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Gm12585-201ENSMUST00000117307 290 ntBASIC10.36□□□□□ -0.75
Rom1P32958 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Rom1P32958 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC10.36□□□□□ -0.75
Rom1P32958 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Rom1P32958 Gm18206-201ENSMUST00000207027 926 ntBASIC10.36□□□□□ -0.75
Rom1P32958 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.36□□□□□ -0.75
Rom1P32958 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.36□□□□□ -0.75
Rom1P32958 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms