Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Btrc-209ENSMUST00000224478 2194 ntBASIC11.95□□□□□ -0.5
Cbx3P23198 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC11.95□□□□□ -0.5
Cbx3P23198 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 CT009713.5-203ENSMUST00000224218 2079 ntBASIC11.95□□□□□ -0.5
Cbx3P23198 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Cbx3P23198 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.94□□□□□ -0.5
Cbx3P23198 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 AC115735.4-201ENSMUST00000227460 1944 ntBASIC11.94□□□□□ -0.5
Cbx3P23198 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Gm36970-201ENSMUST00000193688 1859 ntBASIC11.94□□□□□ -0.5
Cbx3P23198 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.94□□□□□ -0.5
Cbx3P23198 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.94□□□□□ -0.5
Cbx3P23198 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.94□□□□□ -0.5
Cbx3P23198 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.94□□□□□ -0.5
Cbx3P23198 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC11.94□□□□□ -0.5
Cbx3P23198 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.94□□□□□ -0.5
Cbx3P23198 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC11.94□□□□□ -0.5
Cbx3P23198 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.94□□□□□ -0.5
Cbx3P23198 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.94□□□□□ -0.5
Cbx3P23198 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.94□□□□□ -0.5
Cbx3P23198 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Cbx3P23198 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.94□□□□□ -0.5
Cbx3P23198 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cbx3P23198 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Cbx3P23198 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Cbx3P23198 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.93□□□□□ -0.5
Cbx3P23198 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.93□□□□□ -0.5
Cbx3P23198 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.93□□□□□ -0.5
Cbx3P23198 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 CT009713.10-201ENSMUST00000225013 1986 ntBASIC11.93□□□□□ -0.5
Cbx3P23198 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Cbx3P23198 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Cbx3P23198 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.93□□□□□ -0.5
Cbx3P23198 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC11.93□□□□□ -0.5
Cbx3P23198 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cbx3P23198 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms