Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Gm9131-201ENSMUST00000193557 1089 ntBASIC12.56□□□□□ -0.4
Msx1P13297 Gm9121-201ENSMUST00000193749 1071 ntBASIC12.56□□□□□ -0.4
Msx1P13297 Gm38266-201ENSMUST00000194931 421 ntBASIC12.56□□□□□ -0.4
Msx1P13297 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.56□□□□□ -0.4
Msx1P13297 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Msx1P13297 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.56□□□□□ -0.4
Msx1P13297 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.56□□□□□ -0.4
Msx1P13297 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 AC161252.3-201ENSMUST00000225465 1549 ntBASIC12.56□□□□□ -0.4
Msx1P13297 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Msx1P13297 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Msx1P13297 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Msx1P13297 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Msx1P13297 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.55□□□□□ -0.4
Msx1P13297 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
Msx1P13297 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Gm15236-201ENSMUST00000117309 379 ntBASIC12.55□□□□□ -0.4
Msx1P13297 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.55□□□□□ -0.4
Msx1P13297 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.55□□□□□ -0.4
Msx1P13297 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Gm19184-201ENSMUST00000196798 928 ntBASIC12.55□□□□□ -0.4
Msx1P13297 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Msx1P13297 Gm9823-201ENSMUST00000051212 327 ntBASIC12.55□□□□□ -0.4
Msx1P13297 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Msx1P13297 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Msx1P13297 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msx1P13297 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Msx1P13297 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Gm13350-201ENSMUST00000120519 479 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Msx1P13297 Gm16570-201ENSMUST00000161951 436 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Msx1P13297 Mir3547-201ENSMUST00000175461 88 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Gm29288-201ENSMUST00000191582 901 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Gm7498-201ENSMUST00000203282 1084 ntBASIC12.54□□□□□ -0.4
Msx1P13297 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.54□□□□□ -0.4
Msx1P13297 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC12.54□□□□□ -0.4
Msx1P13297 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms