Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Gm37737-201ENSMUST00000195013 1638 ntBASIC11.55□□□□□ -0.56
Ccl3P10855 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Gm4782-201ENSMUST00000168705 2046 ntBASIC11.55□□□□□ -0.56
Ccl3P10855 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC11.55□□□□□ -0.56
Ccl3P10855 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.55□□□□□ -0.56
Ccl3P10855 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Ccl3P10855 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Ccl3P10855 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Daam2-202ENSMUST00000224595 1926 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Gm14028-201ENSMUST00000117434 479 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Gm13665-201ENSMUST00000120830 528 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ccl3P10855 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccl3P10855 Gm23363-201ENSMUST00000175024 79 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Gm27046-201ENSMUST00000182160 463 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC11.54□□□□□ -0.56
Ccl3P10855 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.54□□□□□ -0.56
Ccl3P10855 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11.54□□□□□ -0.56
Ccl3P10855 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.54□□□□□ -0.56
Ccl3P10855 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.54□□□□□ -0.56
Ccl3P10855 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.54□□□□□ -0.56
Ccl3P10855 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ccl3P10855 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Ccl3P10855 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC11.53□□□□□ -0.56
Ccl3P10855 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ccl3P10855 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
Ccl3P10855 Gm4909-201ENSMUST00000118749 794 ntBASIC11.53□□□□□ -0.56
Ccl3P10855 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Tmem205-202ENSMUST00000178988 862 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Ccl3P10855 Mir6979-201ENSMUST00000183927 56 ntBASIC11.53□□□□□ -0.56
Ccl3P10855 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Ccl3P10855 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ccl3P10855 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms