Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Gm44985-201ENSMUST00000206202 1016 ntBASIC13.29□□□□□ -0.28
PdgfrbP05622 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.29□□□□□ -0.28
PdgfrbP05622 Gm18473-201ENSMUST00000220543 868 ntBASIC13.29□□□□□ -0.28
PdgfrbP05622 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
PdgfrbP05622 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.29□□□□□ -0.28
PdgfrbP05622 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
PdgfrbP05622 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.28□□□□□ -0.28
PdgfrbP05622 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Gm9794-201ENSMUST00000202370 423 ntBASIC13.28□□□□□ -0.28
PdgfrbP05622 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.28□□□□□ -0.28
PdgfrbP05622 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
PdgfrbP05622 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.28□□□□□ -0.28
PdgfrbP05622 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
PdgfrbP05622 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.28
PdgfrbP05622 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
PdgfrbP05622 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdgfrbP05622 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PdgfrbP05622 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PdgfrbP05622 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PdgfrbP05622 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
PdgfrbP05622 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
PdgfrbP05622 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
PdgfrbP05622 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdgfrbP05622 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.27□□□□□ -0.29
PdgfrbP05622 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
PdgfrbP05622 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.27□□□□□ -0.29
PdgfrbP05622 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.27□□□□□ -0.29
PdgfrbP05622 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.27□□□□□ -0.29
PdgfrbP05622 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.27□□□□□ -0.29
PdgfrbP05622 Gm19931-201ENSMUST00000198920 368 ntBASIC13.27□□□□□ -0.29
PdgfrbP05622 Gm38671-201ENSMUST00000200573 130 ntBASIC13.27□□□□□ -0.29
PdgfrbP05622 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.27□□□□□ -0.29
PdgfrbP05622 CT009764.1-201ENSMUST00000222260 483 ntBASIC13.27□□□□□ -0.29
PdgfrbP05622 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.27□□□□□ -0.29
PdgfrbP05622 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdgfrbP05622 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
PdgfrbP05622 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
PdgfrbP05622 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdgfrbP05622 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdgfrbP05622 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.27□□□□□ -0.29
PdgfrbP05622 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdgfrbP05622 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
PdgfrbP05622 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdgfrbP05622 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdgfrbP05622 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
PdgfrbP05622 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdgfrbP05622 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdgfrbP05622 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdgfrbP05622 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
PdgfrbP05622 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.26□□□□□ -0.29
PdgfrbP05622 Gm12490-201ENSMUST00000120255 560 ntBASIC13.26□□□□□ -0.29
PdgfrbP05622 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
PdgfrbP05622 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC13.26□□□□□ -0.29
PdgfrbP05622 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms