Protein–RNA interactions for Protein: P02301

H3f3c, Histone H3.3C, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3cP02301 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H3f3cP02301 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H3f3cP02301 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.28□□□□□ -0.6
H3f3cP02301 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Gm5912-201ENSMUST00000122282 1438 ntBASIC11.28□□□□□ -0.6
H3f3cP02301 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.28□□□□□ -0.6
H3f3cP02301 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
H3f3cP02301 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Gm27194-201ENSMUST00000175753 2936 ntBASIC11.28□□□□□ -0.6
H3f3cP02301 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H3f3cP02301 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Gm9002-201ENSMUST00000178437 499 ntBASIC11.28□□□□□ -0.6
H3f3cP02301 Gm7287-201ENSMUST00000205267 602 ntBASIC11.28□□□□□ -0.6
H3f3cP02301 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.28□□□□□ -0.6
H3f3cP02301 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC11.28□□□□□ -0.6
H3f3cP02301 Itm2b-204ENSMUST00000228637 783 ntBASIC11.28□□□□□ -0.6
H3f3cP02301 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
H3f3cP02301 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
H3f3cP02301 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
H3f3cP02301 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
H3f3cP02301 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3cP02301 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3cP02301 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3cP02301 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
H3f3cP02301 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3cP02301 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
H3f3cP02301 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
H3f3cP02301 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3cP02301 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
H3f3cP02301 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.27□□□□□ -0.61
H3f3cP02301 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.27□□□□□ -0.61
H3f3cP02301 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
H3f3cP02301 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H3f3cP02301 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.27□□□□□ -0.61
H3f3cP02301 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Gm15806-201ENSMUST00000120696 955 ntBASIC11.27□□□□□ -0.61
H3f3cP02301 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
H3f3cP02301 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
H3f3cP02301 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.27□□□□□ -0.61
H3f3cP02301 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.27□□□□□ -0.61
H3f3cP02301 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.27□□□□□ -0.61
H3f3cP02301 AC110817.1-201ENSMUST00000225706 605 ntBASIC11.27□□□□□ -0.61
H3f3cP02301 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
H3f3cP02301 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H3f3cP02301 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
H3f3cP02301 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
H3f3cP02301 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
H3f3cP02301 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms