Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC14.16□□□□□ -0.14
Vti1aO89116 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
Vti1aO89116 CT009713.10-202ENSMUST00000225734 696 ntBASIC14.16□□□□□ -0.14
Vti1aO89116 Gm2824-203ENSMUST00000226189 1228 ntBASIC14.16□□□□□ -0.14
Vti1aO89116 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Vti1aO89116 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
Vti1aO89116 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vti1aO89116 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vti1aO89116 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.15□□□□□ -0.14
Vti1aO89116 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Mir686-201ENSMUST00000102174 109 ntBASIC14.15□□□□□ -0.14
Vti1aO89116 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.15□□□□□ -0.14
Vti1aO89116 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC14.15□□□□□ -0.14
Vti1aO89116 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Gm3961-201ENSMUST00000204425 994 ntBASIC14.15□□□□□ -0.14
Vti1aO89116 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.15□□□□□ -0.14
Vti1aO89116 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Gm10146-201ENSMUST00000072739 309 ntBASIC14.15□□□□□ -0.14
Vti1aO89116 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC14.15□□□□□ -0.14
Vti1aO89116 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vti1aO89116 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.15□□□□□ -0.14
Vti1aO89116 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Vti1aO89116 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vti1aO89116 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC14.14□□□□□ -0.15
Vti1aO89116 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC14.14□□□□□ -0.15
Vti1aO89116 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.14□□□□□ -0.15
Vti1aO89116 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC14.14□□□□□ -0.15
Vti1aO89116 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC14.14□□□□□ -0.15
Vti1aO89116 Gm27501-201ENSMUST00000183599 107 ntBASIC14.14□□□□□ -0.15
Vti1aO89116 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.14□□□□□ -0.15
Vti1aO89116 Gm37497-201ENSMUST00000195830 798 ntBASIC14.14□□□□□ -0.15
Vti1aO89116 Gm44364-201ENSMUST00000198368 141 ntBASIC14.14□□□□□ -0.15
Vti1aO89116 Gm42929-201ENSMUST00000198374 1286 ntBASIC14.14□□□□□ -0.15
Vti1aO89116 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.14□□□□□ -0.15
Vti1aO89116 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.14□□□□□ -0.15
Vti1aO89116 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.14□□□□□ -0.15
Vti1aO89116 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Vti1aO89116 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vti1aO89116 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC14.14□□□□□ -0.15
Vti1aO89116 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC14.14□□□□□ -0.15
Vti1aO89116 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vti1aO89116 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
Vti1aO89116 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vti1aO89116 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms