Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx1-1G3UXB3 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx1-1G3UXB3 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.54■□□□□ 0.08
Nkx1-1G3UXB3 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Nkx1-1G3UXB3 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Nkx1-1G3UXB3 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm25880-201ENSMUST00000104331 132 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm9062-201ENSMUST00000117712 727 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm26361-201ENSMUST00000158868 186 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 1700020M21Rik-201ENSMUST00000188320 644 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 4633401B06Rik-201ENSMUST00000198169 1073 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Trdv3-201ENSMUST00000198551 309 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm44837-201ENSMUST00000206863 717 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 AC138284.2-201ENSMUST00000213982 567 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 AC125486.1-201ENSMUST00000218701 320 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 mt-Td-201ENSMUST00000082404 70 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Nkx1-1G3UXB3 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm6580-201ENSMUST00000117504 1357 ntBASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Pfn4-201ENSMUST00000020967 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm15077-201ENSMUST00000122344 362 ntBASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 1700099I09Rik-201ENSMUST00000167834 769 ntTSL 2 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm26804-201ENSMUST00000181248 1017 ntTSL 5 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm28064-201ENSMUST00000185639 858 ntBASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm29478-201ENSMUST00000191272 688 ntTSL 3 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Gm45845-201ENSMUST00000207326 582 ntBASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Olfr452-201ENSMUST00000075468 954 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Nkx1-1G3UXB3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Gm28440-201ENSMUST00000186328 1499 ntTSL 5 BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Nkx1-1G3UXB3 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Gm5148-203ENSMUST00000108105 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Gm11618-201ENSMUST00000117946 267 ntBASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Gm12757-201ENSMUST00000119465 800 ntBASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Gm13460-201ENSMUST00000121274 353 ntBASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Gm11871-201ENSMUST00000122429 1061 ntBASIC15.51■□□□□ 0.07
Nkx1-1G3UXB3 Olfr75-ps1-201ENSMUST00000135477 938 ntBASIC15.51■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms