Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.77■□□□□ 0.12
NpcdF8VQB8 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Gm14109-201ENSMUST00000118814 309 ntBASIC15.77■□□□□ 0.12
NpcdF8VQB8 Gm9211-201ENSMUST00000182882 975 ntBASIC15.77■□□□□ 0.12
NpcdF8VQB8 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.77■□□□□ 0.12
NpcdF8VQB8 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
NpcdF8VQB8 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.77■□□□□ 0.11
NpcdF8VQB8 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.77■□□□□ 0.11
NpcdF8VQB8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
NpcdF8VQB8 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC15.76■□□□□ 0.11
NpcdF8VQB8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Gm4366-201ENSMUST00000201488 1342 ntBASIC15.76■□□□□ 0.11
NpcdF8VQB8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Gm6447-201ENSMUST00000118905 835 ntBASIC15.76■□□□□ 0.11
NpcdF8VQB8 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 CT025694.1-201ENSMUST00000226188 934 ntBASIC15.76■□□□□ 0.11
NpcdF8VQB8 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.76■□□□□ 0.11
NpcdF8VQB8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
NpcdF8VQB8 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Gm25214-201ENSMUST00000104573 129 ntBASIC15.75■□□□□ 0.11
NpcdF8VQB8 Gm12502-201ENSMUST00000120197 444 ntBASIC15.75■□□□□ 0.11
NpcdF8VQB8 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Gm28693-202ENSMUST00000190758 331 ntBASIC15.75■□□□□ 0.11
NpcdF8VQB8 Gm18393-201ENSMUST00000208349 1131 ntBASIC15.75■□□□□ 0.11
NpcdF8VQB8 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.75■□□□□ 0.11
NpcdF8VQB8 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15.75■□□□□ 0.11
NpcdF8VQB8 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
NpcdF8VQB8 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
NpcdF8VQB8 Gm8337-201ENSMUST00000187358 1938 ntBASIC15.74■□□□□ 0.11
NpcdF8VQB8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms