Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Gm37827-201ENSMUST00000194486 1542 ntBASIC15.69■□□□□ 0.1
Ube4aE9Q735 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Gm8908-201ENSMUST00000121633 1024 ntBASIC15.69■□□□□ 0.1
Ube4aE9Q735 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.69■□□□□ 0.1
Ube4aE9Q735 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.69■□□□□ 0.1
Ube4aE9Q735 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ube4aE9Q735 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm24830-201ENSMUST00000102024 166 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm12058-201ENSMUST00000118614 437 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm13875-201ENSMUST00000120162 282 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm25890-201ENSMUST00000177643 165 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Rnu1b2-201ENSMUST00000178073 165 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Rnu1b1-201ENSMUST00000178250 165 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm22614-201ENSMUST00000178300 165 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm18827-201ENSMUST00000188341 790 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm22042-201ENSMUST00000082989 165 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm26232-201ENSMUST00000083360 166 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm24136-201ENSMUST00000083374 165 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Rnu1b6-201ENSMUST00000083839 166 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm26110-201ENSMUST00000083971 165 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.68■□□□□ 0.1
Ube4aE9Q735 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ube4aE9Q735 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Gm23270-201ENSMUST00000104055 131 ntBASIC15.67■□□□□ 0.1
Ube4aE9Q735 Gm16570-201ENSMUST00000161951 436 ntBASIC15.67■□□□□ 0.1
Ube4aE9Q735 Gm2383-201ENSMUST00000181461 807 ntBASIC15.67■□□□□ 0.1
Ube4aE9Q735 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ube4aE9Q735 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms