Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Srp54bE9PXC0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Srp54bE9PXC0 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gm6203-201ENSMUST00000209575 1342 ntBASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gm6023-201ENSMUST00000118217 606 ntBASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gm12241-201ENSMUST00000118330 726 ntBASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gm29396-201ENSMUST00000185659 716 ntBASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Srp54bE9PXC0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm8793-201ENSMUST00000183069 1303 ntBASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm12363-201ENSMUST00000122250 668 ntBASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm7809-201ENSMUST00000153199 742 ntBASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.93□□□□□ -0.34
Srp54bE9PXC0 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm7783-201ENSMUST00000204795 781 ntBASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Srp54bE9PXC0 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm13350-201ENSMUST00000120519 479 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm11978-201ENSMUST00000122315 466 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm13786-201ENSMUST00000122371 333 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm7584-201ENSMUST00000175829 940 ntBASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Srp54bE9PXC0 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms