Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Col4a6B1AVK5 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Mir874-201ENSMUST00000104769 76 ntBASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Gm9996-201ENSMUST00000070359 913 ntBASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC13.21□□□□□ -0.29
Col4a6B1AVK5 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Gm9279-201ENSMUST00000223175 1606 ntBASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Col4a6B1AVK5 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Gm27627-201ENSMUST00000183644 150 ntBASIC13.21□□□□□ -0.3
Col4a6B1AVK5 1700011B04Rik-203ENSMUST00000220654 1033 ntTSL 5 BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 1700011B04Rik-209ENSMUST00000221760 779 ntTSL 5 BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Col4a6B1AVK5 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Gm13035-201ENSMUST00000117496 342 ntBASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Gm13611-201ENSMUST00000118269 318 ntBASIC13.2□□□□□ -0.3
Col4a6B1AVK5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Gm19459-201ENSMUST00000176240 835 ntBASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 AC154849.4-201ENSMUST00000224868 365 ntBASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Col4a6B1AVK5 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a6B1AVK5 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms