Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.15□□□□□ -0.3
H2afb2S4R1M3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Gm12928-201ENSMUST00000117115 573 ntBASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Gm27701-201ENSMUST00000184498 110 ntBASIC13.15□□□□□ -0.3
H2afb2S4R1M3 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Gm2495-201ENSMUST00000191160 466 ntBASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
H2afb2S4R1M3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.31
H2afb2S4R1M3 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
H2afb2S4R1M3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm12091-201ENSMUST00000146791 830 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm6152-201ENSMUST00000151704 340 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm28911-201ENSMUST00000188837 117 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm18473-201ENSMUST00000220543 868 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
H2afb2S4R1M3 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.13□□□□□ -0.31
H2afb2S4R1M3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Gm8515-201ENSMUST00000194852 576 ntBASIC13.13□□□□□ -0.31
H2afb2S4R1M3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
H2afb2S4R1M3 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms