Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Gm15222-202ENSMUST00000228667 1726 ntBASIC12.82□□□□□ -0.36
Cdh17Q9R100 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Cdh17Q9R100 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Gm3365-201ENSMUST00000216296 1480 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Cdh17Q9R100 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Gm44985-201ENSMUST00000206202 1016 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.81□□□□□ -0.36
Cdh17Q9R100 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Cdh17Q9R100 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gm15920-201ENSMUST00000118998 402 ntBASIC12.8□□□□□ -0.36
Cdh17Q9R100 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gm20949-201ENSMUST00000206478 952 ntBASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gm19220-201ENSMUST00000222682 803 ntBASIC12.8□□□□□ -0.36
Cdh17Q9R100 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.8□□□□□ -0.36
Cdh17Q9R100 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.8□□□□□ -0.36
Cdh17Q9R100 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Cdh17Q9R100 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms