Protein–RNA interactions for Protein: Q9R0A5

Nek3, Serine/threonine-protein kinase Nek3, mousemouse

Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek3Q9R0A5 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Gm44758-201ENSMUST00000206096 2068 ntBASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Patj-201ENSMUST00000030290 2495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Nek3Q9R0A5 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 AC154305.4-201ENSMUST00000224520 614 ntBASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.38□□□□□ -0.11
Nek3Q9R0A5 AC154262.2-202ENSMUST00000225158 1331 ntBASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Nek3Q9R0A5 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 AC164702.1-201ENSMUST00000220135 2212 ntBASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Gm44124-201ENSMUST00000204159 472 ntBASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Gm26315-201ENSMUST00000083890 321 ntBASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Nek3Q9R0A5 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.36□□□□□ -0.11
Nek3Q9R0A5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.36□□□□□ -0.11
Nek3Q9R0A5 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nek3Q9R0A5 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Nek3Q9R0A5 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.36□□□□□ -0.11
Nek3Q9R0A5 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.36□□□□□ -0.11
Nek3Q9R0A5 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Nek3Q9R0A5 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms