Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.49□□□□□ -0.73
Smco4Q9JIS3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Rac1-201ENSMUST00000080537 4159 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Gm45098-201ENSMUST00000207179 657 ntBASIC10.49□□□□□ -0.73
Smco4Q9JIS3 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 AC153881.2-201ENSMUST00000214877 204 ntBASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC10.49□□□□□ -0.73
Smco4Q9JIS3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 2410002F23Rik-204ENSMUST00000107948 2908 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Poc5-201ENSMUST00000099295 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Gm3809-201ENSMUST00000180973 1006 ntBASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Smco4Q9JIS3 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Gm12882-201ENSMUST00000121696 517 ntBASIC10.47□□□□□ -0.73
Smco4Q9JIS3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC10.47□□□□□ -0.73
Smco4Q9JIS3 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms