Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Gm6210-201ENSMUST00000204734 1942 ntBASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Gm11531-201ENSMUST00000117614 555 ntBASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Treml1-201ENSMUST00000024792 1235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Nmral1-203ENSMUST00000115851 1306 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Gm43858-201ENSMUST00000199418 1778 ntBASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cpsf1Q9EPU4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Gm3052-202ENSMUST00000188254 2224 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Mir877-201ENSMUST00000104738 85 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Gm14726-201ENSMUST00000120623 896 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Gm27320-201ENSMUST00000184892 109 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Gm8176-201ENSMUST00000191297 1099 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 AC166095.1-201ENSMUST00000223731 1241 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Gm43823-201ENSMUST00000197391 1808 ntBASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cpsf1Q9EPU4 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm13394-201ENSMUST00000121658 1000 ntBASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Olfr668-201ENSMUST00000164391 957 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm2546-201ENSMUST00000182630 991 ntBASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm5950-201ENSMUST00000213337 772 ntBASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Olfr667-201ENSMUST00000071362 981 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Olfr666-201ENSMUST00000081116 957 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
Cpsf1Q9EPU4 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Gm19221-201ENSMUST00000221827 1477 ntBASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cpsf1Q9EPU4 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms