Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Sf3a3Q9D554 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Gm5466-201ENSMUST00000119395 1890 ntBASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Gm27631-201ENSMUST00000184163 466 ntBASIC13.28□□□□□ -0.28
Sf3a3Q9D554 AA619741-201ENSMUST00000195095 646 ntBASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Gm5364-201ENSMUST00000216789 889 ntBASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Sstr3-201ENSMUST00000053239 3928 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Sf3a3Q9D554 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.27□□□□□ -0.28
Sf3a3Q9D554 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3a3Q9D554 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3a3Q9D554 Gm27177-202ENSMUST00000183514 2703 ntBASIC13.27□□□□□ -0.28
Sf3a3Q9D554 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3a3Q9D554 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Sf3a3Q9D554 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3a3Q9D554 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Sf3a3Q9D554 Ehbp1l1-202ENSMUST00000075606 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.27□□□□□ -0.29
Sf3a3Q9D554 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.27□□□□□ -0.29
Sf3a3Q9D554 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Sf3a3Q9D554 Plk2-201ENSMUST00000022212 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Gm45453-201ENSMUST00000211758 853 ntBASIC13.26□□□□□ -0.29
Sf3a3Q9D554 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.26□□□□□ -0.29
Sf3a3Q9D554 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC13.26□□□□□ -0.29
Sf3a3Q9D554 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 423.8 ms