Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Gm15371-201ENSMUST00000117057 784 ntBASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Khdc3Q9CWU5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gm45668-201ENSMUST00000211271 493 ntBASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gm7446-201ENSMUST00000221035 1240 ntBASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC12.62□□□□□ -0.39
Khdc3Q9CWU5 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Khdc3Q9CWU5 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms