Protein–RNA interactions for Protein: Q99LM2

Cdk5rap3, CDK5 regulatory subunit-associated protein 3, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap3Q99LM2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Rnps1-201ENSMUST00000088512 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap3Q99LM2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm26616-202ENSMUST00000195676 3107 ntBASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Mir6956-201ENSMUST00000183598 62 ntBASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 AC134335.2-201ENSMUST00000227660 440 ntBASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm5422-201ENSMUST00000050717 2721 ntBASIC13.62□□□□□ -0.23
Cdk5rap3Q99LM2 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Mir7684-201ENSMUST00000183858 60 ntBASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.61□□□□□ -0.23
Cdk5rap3Q99LM2 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 55.7 ms