Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cstf3Q99LI7 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm16215-201ENSMUST00000161990 637 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm6254-201ENSMUST00000168178 1072 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm42550-201ENSMUST00000201553 960 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 CT573086.1-201ENSMUST00000227202 1074 ntBASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cstf3Q99LI7 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Ldb3-207ENSMUST00000227819 1499 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Ldha-ps-201ENSMUST00000119390 995 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Gm38223-201ENSMUST00000194484 695 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Gm19931-201ENSMUST00000198920 368 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Gm7730-201ENSMUST00000212486 454 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 AC124732.1-201ENSMUST00000221551 910 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Cstf3Q99LI7 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms