Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Gm38223-201ENSMUST00000194484 695 ntBASIC11.03□□□□□ -0.64
H1fooQ8VIK3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Gm5466-201ENSMUST00000119395 1890 ntBASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
H1fooQ8VIK3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
H1fooQ8VIK3 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
H1fooQ8VIK3 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm12341-201ENSMUST00000119724 503 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Mir6977-201ENSMUST00000184960 64 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm28631-201ENSMUST00000190740 334 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Gm18307-201ENSMUST00000206864 949 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
H1fooQ8VIK3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC11.01□□□□□ -0.65
H1fooQ8VIK3 Rn7sk-201ENSMUST00000083103 331 ntBASIC11.01□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms