Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Gm5354-201ENSMUST00000182417 973 ntBASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 AC154846.1-201ENSMUST00000226278 862 ntBASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Gm9200-201ENSMUST00000118513 1354 ntBASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Vps4aQ8VEJ9 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Gm17794-201ENSMUST00000220252 955 ntBASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Vps4aQ8VEJ9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Vps4aQ8VEJ9 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms