Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Ccdc58Q8R3Q6 Gm37472-201ENSMUST00000192342 4052 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm37513-201ENSMUST00000194830 2268 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm38378-201ENSMUST00000195153 2268 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm14494-201ENSMUST00000118786 435 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm12428-201ENSMUST00000119844 727 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm13385-201ENSMUST00000121089 220 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Ccdc58Q8R3Q6 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 AC122860.2-201ENSMUST00000217967 2671 ntBASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm4913-201ENSMUST00000117075 1290 ntBASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Gm6157-201ENSMUST00000199935 1897 ntBASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ccdc58Q8R3Q6 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms