Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Gm13385-201ENSMUST00000121089 220 ntBASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ebf4Q8K4J2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ebf4Q8K4J2 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ebf4Q8K4J2 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 AC157950.1-201ENSMUST00000217561 2168 ntBASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Gm14140-201ENSMUST00000119999 995 ntBASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Gm27525-201ENSMUST00000184465 107 ntBASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Gm44124-201ENSMUST00000204159 472 ntBASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Gm18636-201ENSMUST00000218846 1066 ntBASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ebf4Q8K4J2 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms